Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | AMR72_RS08580 | Not Available | Positive | 1956719 - 1957717 | 36365.5 |
| site-specific integrase | AMR72_RS08585 | Not Available | Positive | 1958034 - 1959335 | 48619.4 |
| hypothetical protein | AMR72_RS08590 | Not Available | Positive | 1959362 - 1960162 | 30793.6 |
| helix-turn-helix domain-containing protein | AMR72_RS08595 | Not Available | Positive | 1960245 - 1960532 | 10845.3 |
| hypothetical protein | AMR72_RS08600 | Not Available | Positive | 1960526 - 1961440 | 35876.2 |
| type i restriction endonuclease subunit r | AMR72_RS08605 | Not Available | Negative | 1961524 - 1964718 | 122803.0 |
| mcrc family protein | AMR72_RS08610 | Not Available | Negative | 1964725 - 1966053 | 51823.2 |
| mcrb family protein | AMR72_RS08615 | Not Available | Negative | 1966043 - 1968319 | 88060.0 |
| restriction endonuclease subunit s | AMR72_RS08620 | Not Available | Negative | 1968329 - 1969612 | 48961.8 |
| class i sam-dependent dna methyltransferase | AMR72_RS08625 | Not Available | Negative | 1969609 - 1971177 | 59234.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
