Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | AMR72_RS00810 | Not Available | Negative | 186052 - 188883 | 104690.0 |
| gyri-like domain-containing protein | AMR72_RS00815 | Not Available | Positive | 189029 - 189505 | 18079.4 |
| thioredoxin-like domain-containing protein | AMR72_RS00820 | Not Available | Negative | 189601 - 190989 | 54548.0 |
| abc-f family atp-binding cassette domain-containing protein | AMR72_RS00825 | Not Available | Positive | 191133 - 192755 | 61338.8 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | AMR72_RS00830 | Not Available | Positive | 193186 - 193719 | 20673.9 |
| aspartate carbamoyltransferase catalytic subunit | AMR72_RS00835 | Not Available | Positive | 193744 - 194673 | 34278.6 |
| hypothetical protein | AMR72_RS00840 | Not Available | Positive | 194785 - 195117 | 12661.1 |
| ribonuclease z | AMR72_RS00845 | Not Available | Positive | 195194 - 196099 | 34275.9 |
| pyridoxamine 5'-phosphate oxidase | AMR72_RS00850 | Not Available | Positive | 196158 - 196802 | 24891.4 |
| histidine phosphatase family protein | AMR72_RS00855 | Not Available | Positive | 196905 - 197426 | 19629.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
