Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrtr dna-binding winged helix domain-containing protein | AMR72_RS08425 | Not Available | Negative | 1900896 - 1901615 | 27461.2 |
| fggy-family carbohydrate kinase | AMR72_RS08430 | Not Available | Positive | 1901864 - 1903390 | 55397.7 |
| xylose isomerase | AMR72_RS08435 | Not Available | Positive | 1903359 - 1904684 | 49821.5 |
| tonb-dependent receptor | AMR72_RS08440 | Not Available | Positive | 1904734 - 1907841 | 113383.0 |
| ragb/susd family nutrient uptake outer membrane protein | AMR72_RS08445 | Not Available | Positive | 1907854 - 1909440 | 58643.7 |
| hypothetical protein | AMR72_RS08450 | Not Available | Positive | 1909466 - 1910302 | 30943.0 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | AMR72_RS08455 | Not Available | Positive | 1910362 - 1912839 | 91479.5 |
| glycoside hydrolase family 97 protein | AMR72_RS08460 | Not Available | Positive | 1913012 - 1915012 | 75889.2 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | AMR72_RS08465 | Not Available | Positive | 1915016 - 1917175 | 79457.7 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | AMR72_RS08470 | Not Available | Positive | 1917188 - 1919431 | 81332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
