Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS08275 | Not Available | Positive | 1871727 - 1872137 | 16045.1 |
| imm27 family immunity protein | AMR72_RS08280 | Not Available | Positive | 1872302 - 1872577 | 10593.6 |
| thioredoxin family protein | AMR72_RS08285 | Not Available | Negative | 1872860 - 1873477 | 23173.7 |
| patatin-like phospholipase family protein | AMR72_RS08290 | Not Available | Positive | 1873576 - 1874370 | 29204.8 |
| ump kinase | AMR72_RS08295 | Not Available | Positive | 1874463 - 1875170 | 25645.2 |
| ribosome recycling factor | AMR72_RS08300 | Not Available | Positive | 1875193 - 1875753 | 20507.6 |
| duf5686 family protein | AMR72_RS08305 | Not Available | Positive | 1875845 - 1878340 | 95345.1 |
| multidrug efflux smr transporter | AMR72_RS08310 | Not Available | Negative | 1878418 - 1878744 | 11707.6 |
| asparagine--trna ligase | AMR72_RS08315 | Not Available | Positive | 1878973 - 1880406 | 54539.0 |
| rna polymerase factor sigma-54 | AMR72_RS08320 | Not Available | Positive | 1880857 - 1882323 | 56374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
