Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | AMR72_RS08175 | Not Available | Positive | 1852833 - 1853591 | 29315.5 |
| phosphoenolpyruvate carboxykinase (atp) | AMR72_RS08180 | Not Available | Negative | 1853870 - 1855471 | 58964.3 |
| duf423 domain-containing protein | AMR72_RS08185 | Not Available | Negative | 1855550 - 1855936 | 13967.9 |
| saccharopine dehydrogenase family protein | AMR72_RS08190 | Not Available | Positive | 1856045 - 1857415 | 51792.3 |
| lrp/asnc family transcriptional regulator | AMR72_RS08195 | Not Available | Positive | 1857531 - 1858001 | 17632.8 |
| family 16 glycosylhydrolase | AMR72_RS08200 | Not Available | Positive | 1858247 - 1859128 | 33032.6 |
| voc family protein | AMR72_RS08205 | Not Available | Negative | 1859169 - 1859603 | 16121.9 |
| dsba family protein | AMR72_RS08210 | Not Available | Negative | 1859758 - 1860675 | 34773.7 |
| zinc metallopeptidase | AMR72_RS08215 | Not Available | Negative | 1860945 - 1861643 | 25167.7 |
| hypothetical protein | AMR72_RS08220 | Not Available | Negative | 1861752 - 1862459 | 26264.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
