Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | AMR72_RS08025 | Not Available | Positive | 1822376 - 1822906 | 20219.2 |
| trna1(val) (adenine(37)-n6)-methyltransferase | AMR72_RS08030 | Not Available | Positive | 1823024 - 1823728 | 26723.4 |
| hypothetical protein | AMR72_RS08035 | Not Available | Negative | 1823729 - 1824487 | 28466.1 |
| acyl-coa dehydrogenase family protein | AMR72_RS08040 | Not Available | Positive | 1824683 - 1825861 | 43547.4 |
| duf3050 domain-containing protein | AMR72_RS08045 | Not Available | Positive | 1826117 - 1826902 | 29801.5 |
| m43 family zinc metalloprotease | AMR72_RS08050 | Not Available | Positive | 1827062 - 1829113 | 75052.2 |
| histidine kinase | AMR72_RS08055 | Not Available | Positive | 1829285 - 1830319 | 39279.0 |
| lyttr family dna-binding domain-containing protein | AMR72_RS08060 | Not Available | Positive | 1830316 - 1830996 | 26468.6 |
| m43 family zinc metalloprotease | AMR72_RS08065 | Not Available | Positive | 1831188 - 1832567 | 51045.8 |
| hypothetical protein | AMR72_RS08070 | Not Available | Negative | 1832691 - 1833014 | 11597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
