Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | AMR72_RS07975 | Not Available | Negative | 1811597 - 1812184 | 21347.3 |
| Trna-asp | Not Available | Not Available | Positive | 1812408 - 1812484 | Not Available |
| duf58 domain-containing protein | AMR72_RS07985 | Not Available | Negative | 1812607 - 1813533 | 35967.1 |
| nadh:flavin oxidoreductase | AMR72_RS07990 | Not Available | Negative | 1813659 - 1814720 | 39685.1 |
| helix-turn-helix domain-containing protein | AMR72_RS07995 | Not Available | Positive | 1814853 - 1815224 | 14071.3 |
| thioredoxin | AMR72_RS08000 | Not Available | Negative | 1815278 - 1815598 | 11489.8 |
| dna polymerase iii subunit alpha | AMR72_RS08005 | Not Available | Negative | 1815715 - 1820220 | 169824.0 |
| rna-binding protein | AMR72_RS08010 | Not Available | Negative | 1820509 - 1820889 | 13736.7 |
| duf6252 family protein | AMR72_RS08015 | Not Available | Negative | 1821055 - 1821600 | 19419.0 |
| 30s ribosomal protein s16 | AMR72_RS08020 | Not Available | Positive | 1821805 - 1822359 | 19829.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
