Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | AMR72_RS07875 | Not Available | Negative | 1795401 - 1795970 | 21843.0 |
| Trna-leu | Not Available | Not Available | Positive | 1796076 - 1796160 | Not Available |
| hypothetical protein | AMR72_RS07885 | Not Available | Positive | 1796371 - 1796676 | 12069.5 |
| Trna-leu | Not Available | Not Available | Positive | 1796749 - 1796833 | Not Available |
| dipeptidase | AMR72_RS07895 | Not Available | Positive | 1796978 - 1798366 | 51450.1 |
| wg repeat-containing protein | AMR72_RS07900 | Not Available | Positive | 1798513 - 1798941 | 15865.2 |
| rna polymerase sigma factor | AMR72_RS07905 | Not Available | Positive | 1798943 - 1799482 | 20384.7 |
| hypothetical protein | AMR72_RS07910 | Not Available | Positive | 1799472 - 1800374 | 32901.8 |
| blai/meci/copy family transcriptional regulator | AMR72_RS07915 | Not Available | Positive | 1800492 - 1800863 | 14441.4 |
| m56 family metallopeptidase | AMR72_RS07920 | Not Available | Positive | 1800972 - 1802456 | 56696.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
