Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | AMR72_RS07775 | Not Available | Negative | 1772653 - 1773894 | 46836.8 |
| ribosome assembly cofactor rimp | AMR72_RS07780 | Not Available | Negative | 1773914 - 1774378 | 17120.4 |
| universal stress protein | AMR72_RS07785 | Not Available | Positive | 1774551 - 1775378 | 30742.7 |
| Trna-gln | Not Available | Not Available | Positive | 1775663 - 1775733 | Not Available |
| duf2723 domain-containing protein | AMR72_RS07795 | Not Available | Positive | 1775882 - 1779163 | 126205.0 |
| duf2723 domain-containing protein | AMR72_RS07800 | Not Available | Positive | 1779318 - 1782599 | 126557.0 |
| polysaccharide deacetylase family protein | AMR72_RS07805 | Not Available | Positive | 1782669 - 1783307 | 24337.3 |
| co-chaperone ybbn | AMR72_RS07810 | Not Available | Negative | 1783304 - 1783600 | 11020.4 |
| metallophosphoesterase | AMR72_RS07815 | Not Available | Negative | 1783687 - 1784904 | 46899.9 |
| helix-turn-helix domain-containing protein | AMR72_RS07820 | Not Available | Negative | 1784956 - 1785324 | 14312.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
