Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit iv family protein | AMR72_RS07625 | Not Available | Negative | 1731169 - 1731519 | 13718.2 |
| cytochrome c oxidase subunit 3 | AMR72_RS07630 | Not Available | Negative | 1731542 - 1732531 | 37347.4 |
| heme-copper oxidase subunit iii | AMR72_RS07635 | Not Available | Negative | 1732579 - 1733160 | 22067.4 |
| heme o synthase | AMR72_RS07640 | Not Available | Negative | 1733164 - 1734078 | 33736.2 |
| deoxyribose-phosphate aldolase | AMR72_RS07645 | Not Available | Negative | 1734366 - 1735109 | 26705.2 |
| vanz family protein | AMR72_RS07650 | Not Available | Negative | 1735157 - 1735489 | 12499.8 |
| glycine cleavage system protein gcvh | AMR72_RS07655 | Not Available | Negative | 1735521 - 1735901 | 14049.4 |
| cell surface protein spra | AMR72_RS07660 | Not Available | Negative | 1735960 - 1743276 | 274073.0 |
| holliday junction branch migration protein ruva | AMR72_RS07665 | Not Available | Negative | 1743280 - 1743861 | 21106.7 |
| nadp-dependent malic enzyme | AMR72_RS07670 | Not Available | Negative | 1743919 - 1746210 | 83731.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
