Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase | AMR72_RS00710 | Not Available | Negative | 160151 - 161209 | 40438.6 |
| 4fe-4s dicluster domain-containing protein | AMR72_RS00715 | Not Available | Positive | 161285 - 161638 | 13000.9 |
| hypothetical protein | AMR72_RS00720 | Not Available | Negative | 161702 - 162229 | 18954.0 |
| redox-regulated atpase ychf | AMR72_RS00725 | Not Available | Positive | 162485 - 163579 | 40290.1 |
| tigr02117 family protein | AMR72_RS00730 | Not Available | Positive | 163912 - 164595 | 26033.9 |
| transglutaminase domain-containing protein | AMR72_RS00735 | Not Available | Positive | 164928 - 165911 | 36419.4 |
| dna topoisomerase iv subunit b | AMR72_RS00740 | Not Available | Positive | 166037 - 167887 | 70383.1 |
| dna gyrase/topoisomerase iv subunit a | AMR72_RS00745 | Not Available | Positive | 167960 - 170596 | 99460.4 |
| ompa family protein | AMR72_RS00750 | Not Available | Negative | 170706 - 171551 | 31374.0 |
| glycosyltransferase family 2 protein | AMR72_RS00755 | Not Available | Negative | 171616 - 172623 | 39334.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
