Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | AMR72_RS07375 | Not Available | Positive | 1674594 - 1675304 | 27440.7 |
| rna methyltransferase | AMR72_RS07380 | Not Available | Negative | 1675291 - 1676028 | 27276.9 |
| bama/tama family outer membrane protein | AMR72_RS07385 | Not Available | Positive | 1676068 - 1678626 | 97119.5 |
| class ii fructose-bisphosphate aldolase | AMR72_RS07390 | Not Available | Positive | 1678673 - 1679740 | 38867.1 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | AMR72_RS07395 | Not Available | Positive | 1679777 - 1680631 | 31393.9 |
| tetratricopeptide repeat protein | AMR72_RS07400 | Not Available | Positive | 1680931 - 1682718 | 68097.2 |
| abc transporter permease | AMR72_RS07405 | Not Available | Negative | 1683088 - 1684338 | 46195.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AMR72_RS07410 | Not Available | Positive | 1684497 - 1686020 | 55543.8 |
| rod shape-determining protein | AMR72_RS07415 | Not Available | Positive | 1686081 - 1687109 | 37262.8 |
| rod shape-determining protein mrec | AMR72_RS07420 | Not Available | Positive | 1687124 - 1687957 | 31136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
