Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit beta/fixa family protein | AMR72_RS07325 | Not Available | Positive | 1667937 - 1668683 | 26472.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | AMR72_RS07330 | Not Available | Positive | 1668784 - 1669755 | 33933.3 |
| bifunctional nuclease family protein | AMR72_RS07335 | Not Available | Positive | 1669848 - 1670471 | 23055.4 |
| hypothetical protein | AMR72_RS07340 | Not Available | Positive | 1670475 - 1671104 | 23912.9 |
| thymidylate synthase | AMR72_RS07345 | Not Available | Positive | 1671104 - 1671928 | 31266.2 |
| 2tm domain-containing protein | AMR72_RS07350 | Not Available | Positive | 1672010 - 1672366 | 14439.5 |
| dihydrofolate reductase | AMR72_RS07355 | Not Available | Positive | 1672366 - 1672857 | 18549.9 |
| gnat family n-acetyltransferase | AMR72_RS07360 | Not Available | Positive | 1672858 - 1673295 | 16903.2 |
| hypothetical protein | AMR72_RS07365 | Not Available | Positive | 1673326 - 1673784 | 17387.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | AMR72_RS07370 | Not Available | Positive | 1673861 - 1674592 | 26748.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
