Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AMR72_RS07075 | Not Available | Positive | 1612136 - 1614382 | 84289.7 |
| thioredoxin family protein | AMR72_RS07080 | Not Available | Positive | 1614475 - 1614933 | 17434.2 |
| acyl-coa thioesterase | AMR72_RS07085 | Not Available | Negative | 1614934 - 1615320 | 14346.2 |
| beta-ketoacyl-acp synthase iii | AMR72_RS07090 | Not Available | Negative | 1615328 - 1616329 | 35562.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | AMR72_RS07095 | Not Available | Negative | 1616399 - 1618708 | 86869.0 |
| outer membrane beta-barrel family protein | AMR72_RS07100 | Not Available | Negative | 1619140 - 1621488 | 88250.5 |
| sensor histidine kinase kdpd | AMR72_RS07105 | Not Available | Positive | 1621723 - 1623054 | 49838.2 |
| response regulator transcription factor | AMR72_RS07110 | Not Available | Positive | 1623051 - 1623743 | 26271.5 |
| glxa family transcriptional regulator | AMR72_RS07115 | Not Available | Negative | 1623796 - 1624761 | 35908.4 |
| doxx family protein | AMR72_RS07120 | Not Available | Positive | 1624976 - 1625401 | 15684.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
