Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase hera-like domain-containing protein | AMR72_RS07025 | Not Available | Positive | 1598805 - 1600331 | 56051.7 |
| hypothetical protein | AMR72_RS07030 | Not Available | Positive | 1600375 - 1601067 | 26404.4 |
| rna polymerase sigma factor rpod/siga | AMR72_RS07035 | Not Available | Positive | 1601150 - 1602013 | 32875.5 |
| ribulose-phosphate 3-epimerase | AMR72_RS07040 | Not Available | Positive | 1602456 - 1603118 | 24032.1 |
| glycoside hydrolase family 30 beta sandwich domain-containing protein | AMR72_RS07045 | Not Available | Positive | 1603175 - 1604620 | 54279.8 |
| tolc family protein | AMR72_RS07050 | Not Available | Negative | 1604700 - 1606019 | 49730.4 |
| efflux rnd transporter permease subunit | AMR72_RS07055 | Not Available | Negative | 1606032 - 1609106 | 113223.0 |
| efflux rnd transporter periplasmic adaptor subunit | AMR72_RS07060 | Not Available | Negative | 1609108 - 1610190 | 38771.9 |
| hypothetical protein | AMR72_RS07065 | Not Available | Negative | 1610728 - 1610949 | 8241.26 |
| helix-turn-helix domain-containing protein | AMR72_RS07070 | Not Available | Negative | 1611031 - 1611879 | 32379.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
