Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | AMR72_RS06975 | Not Available | Negative | 1587154 - 1589151 | 75799.8 |
| hyc_cc_pp family protein | AMR72_RS06980 | Not Available | Negative | 1589456 - 1589881 | 15844.0 |
| gaf domain-containing protein | AMR72_RS06985 | Not Available | Positive | 1590026 - 1590481 | 17173.3 |
| gh92 family glycosyl hydrolase | AMR72_RS06990 | Not Available | Positive | 1590625 - 1592874 | 84966.3 |
| 30s ribosomal protein s15 | AMR72_RS06995 | Not Available | Positive | 1593047 - 1593316 | 10530.9 |
| polyribonucleotide nucleotidyltransferase | AMR72_RS07000 | Not Available | Positive | 1593461 - 1595788 | 85442.2 |
| gnat family n-acetyltransferase | AMR72_RS07005 | Not Available | Positive | 1595901 - 1596347 | 17263.5 |
| outer membrane protein | AMR72_RS07010 | Not Available | Negative | 1596406 - 1597038 | 23960.4 |
| la_2272 family surface repeat-containing protein | AMR72_RS07015 | Not Available | Negative | 1597051 - 1597701 | 23391.5 |
| hypothetical protein | AMR72_RS07020 | Not Available | Positive | 1597803 - 1598765 | 36685.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
