Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | AMR72_RS06925 | Not Available | Positive | 1576232 - 1577680 | 54873.6 |
| sigma-54-dependent fis family transcriptional regulator | AMR72_RS06930 | Not Available | Positive | 1577736 - 1579016 | 48333.7 |
| lpte family protein | AMR72_RS06935 | Not Available | Positive | 1579033 - 1579539 | 18999.3 |
| hypothetical protein | AMR72_RS06940 | Not Available | Positive | 1579590 - 1580657 | 40537.8 |
| preprotein translocase subunit secg | AMR72_RS06945 | Not Available | Positive | 1580650 - 1581036 | 12930.7 |
| co-chaperone groes | AMR72_RS06950 | Not Available | Positive | 1581192 - 1581467 | 9912.07 |
| chaperonin groel | AMR72_RS06955 | Not Available | Positive | 1581510 - 1583141 | 57043.7 |
| hypothetical protein | AMR72_RS06960 | Not Available | Positive | 1583405 - 1585774 | 88717.1 |
| hypothetical protein | AMR72_RS06965 | Not Available | Negative | 1586264 - 1586653 | 14690.5 |
| heavy-metal-associated domain-containing protein | AMR72_RS06970 | Not Available | Negative | 1586770 - 1587123 | 13221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
