Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AMR72_RS06775 | Not Available | Positive | 1539689 - 1542517 | 105794.0 |
| outer membrane beta-barrel protein | AMR72_RS06780 | Not Available | Positive | 1542621 - 1545446 | 105741.0 |
| ygcg family protein | AMR72_RS06785 | Not Available | Negative | 1545500 - 1546303 | 27747.5 |
| tpm domain-containing protein | AMR72_RS06790 | Not Available | Negative | 1546303 - 1546740 | 16383.0 |
| lema family protein | AMR72_RS06795 | Not Available | Negative | 1546744 - 1547331 | 21523.6 |
| merr family transcriptional regulator | AMR72_RS06800 | Not Available | Negative | 1547344 - 1547673 | 12802.7 |
| m23 family metallopeptidase | AMR72_RS06805 | Not Available | Negative | 1547673 - 1548650 | 36689.0 |
| alanine--trna ligase | AMR72_RS06810 | Not Available | Positive | 1548802 - 1551429 | 97523.1 |
| gscfa domain-containing protein | AMR72_RS06815 | Not Available | Positive | 1551511 - 1552467 | 36248.1 |
| duf4230 domain-containing protein | AMR72_RS06820 | Not Available | Positive | 1552526 - 1553131 | 23159.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
