Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | AMR72_RS06475 | Not Available | Negative | 1483608 - 1484504 | 34448.0 |
| hypothetical protein | AMR72_RS06480 | Not Available | Negative | 1484516 - 1484743 | 9005.13 |
| duf2851 family protein | AMR72_RS06485 | Not Available | Negative | 1484804 - 1486072 | 49512.8 |
| glpgli family protein | AMR72_RS06490 | Not Available | Positive | 1486154 - 1487830 | 62800.8 |
| 3'-5' exonuclease | AMR72_RS06495 | Not Available | Negative | 1487833 - 1488348 | 19753.7 |
| pyridoxal-phosphate dependent enzyme | AMR72_RS06500 | Not Available | Negative | 1488385 - 1489746 | 50343.2 |
| putative porin | AMR72_RS06505 | Not Available | Negative | 1489825 - 1491795 | 76710.1 |
| calx-beta domain-containing protein | AMR72_RS06510 | Not Available | Negative | 1491915 - 1492805 | 31892.6 |
| ragb/susd family nutrient uptake outer membrane protein | AMR72_RS06515 | Not Available | Negative | 1492817 - 1494319 | 54404.8 |
| susc/raga family tonb-linked outer membrane protein | AMR72_RS06520 | Not Available | Negative | 1494338 - 1497460 | 114426.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
