Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 1477516 - 1477589 | Not Available |
| elongation factor tu | AMR72_RS06430 | Not Available | Negative | 1477648 - 1478832 | 42775.5 |
| Trna-thr | Not Available | Not Available | Positive | 1478884 - 1478958 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1478980 - 1479063 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 1479189 - 1479265 | Not Available |
| ribosome hibernation-promoting factor, hpf/yfia family | AMR72_RS06450 | Not Available | Negative | 1479358 - 1479660 | 11633.1 |
| tyrosine-type recombinase/integrase | AMR72_RS06455 | Not Available | Negative | 1479691 - 1480593 | 34317.2 |
| 30s ribosomal protein s21 | AMR72_RS06460 | Not Available | Negative | 1480666 - 1480860 | 7569.42 |
| alpha-amylase | AMR72_RS06465 | Not Available | Negative | 1480934 - 1482289 | 51037.8 |
| acyl-coa dehydrogenase family protein | AMR72_RS06470 | Not Available | Negative | 1482450 - 1483592 | 41720.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
