Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | AMR72_RS06320 | Not Available | Positive | 1452506 - 1453804 | 46608.3 |
| para family protein | AMR72_RS06325 | Not Available | Positive | 1453941 - 1454714 | 28094.9 |
| parb/repb/spo0j family partition protein | AMR72_RS06330 | Not Available | Positive | 1454719 - 1455618 | 33444.2 |
| duf5683 domain-containing protein | AMR72_RS06335 | Not Available | Positive | 1455618 - 1456193 | 21647.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AMR72_RS06340 | Not Available | Positive | 1456197 - 1456898 | 25547.5 |
| signal peptidase i | AMR72_RS06345 | Not Available | Positive | 1456942 - 1458636 | 64723.0 |
| wbqc family protein | AMR72_RS06350 | Not Available | Positive | 1458717 - 1459328 | 24319.7 |
| rhomboid family intramembrane serine protease | AMR72_RS06360 | Not Available | Negative | 1460399 - 1461304 | 33744.2 |
| rhomboid family intramembrane serine protease | AMR72_RS06365 | Not Available | Negative | 1461308 - 1462060 | 27955.8 |
| dna mismatch repair endonuclease mutl | AMR72_RS06370 | Not Available | Negative | 1462060 - 1463946 | 69958.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
