Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | AMR72_RS06070 | Not Available | Negative | 1361873 - 1362655 | 28483.2 |
| s1c family serine protease | AMR72_RS06075 | Not Available | Positive | 1362770 - 1364170 | 50011.6 |
| hypothetical protein | AMR72_RS06080 | Not Available | Positive | 1364254 - 1364802 | 21269.0 |
| hypothetical protein | AMR72_RS06085 | Not Available | Positive | 1365097 - 1365468 | 14252.2 |
| geved domain-containing protein | AMR72_RS06090 | Not Available | Negative | 1365693 - 1368731 | 106315.0 |
| glyceraldehyde-3-phosphate dehydrogenase | AMR72_RS06095 | Not Available | Positive | 1369266 - 1370714 | 53684.0 |
| hypothetical protein | AMR72_RS06100 | Not Available | Negative | 1370981 - 1371175 | 7450.31 |
| eco57i restriction-modification methylase domain-containing protein | AMR72_RS06105 | Not Available | Positive | 1371304 - 1375098 | 145894.0 |
| class i sam-dependent dna methyltransferase | AMR72_RS06110 | Not Available | Negative | 1375060 - 1376037 | 38123.9 |
| master dna invertase mpi family serine-type recombinase | AMR72_RS06115 | Not Available | Positive | 1376092 - 1376709 | 23380.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
