Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | AMR72_RS05970 | Not Available | Positive | 1345308 - 1346408 | 41136.2 |
| had family phosphatase | AMR72_RS05975 | Not Available | Positive | 1346386 - 1347003 | 23746.0 |
| gnat family n-acetyltransferase | AMR72_RS05980 | Not Available | Negative | 1347194 - 1347712 | 20029.8 |
| hypothetical protein | AMR72_RS05985 | Not Available | Negative | 1348025 - 1348348 | 12513.3 |
| duf4279 domain-containing protein | AMR72_RS05990 | Not Available | Negative | 1348405 - 1348803 | 15336.3 |
| hypothetical protein | AMR72_RS05995 | Not Available | Negative | 1348837 - 1349391 | 21065.6 |
| yigz family protein | AMR72_RS06000 | Not Available | Positive | 1349658 - 1350263 | 22935.6 |
| thioesterase family protein | AMR72_RS06005 | Not Available | Negative | 1350366 - 1350770 | 15665.1 |
| chromosomal replication initiator protein dnaa | AMR72_RS06010 | Not Available | Positive | 1350961 - 1352388 | 54473.5 |
| low molecular weight protein-tyrosine-phosphatase | AMR72_RS06015 | Not Available | Positive | 1352388 - 1352858 | 17105.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
