Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AMR72_RS00560 | Not Available | Negative | 117579 - 119306 | 64224.9 |
| sensor protein kdpd | AMR72_RS00565 | Not Available | Negative | 119310 - 120437 | 42471.5 |
| outer membrane beta-barrel protein | AMR72_RS00570 | Not Available | Negative | 120440 - 121819 | 51773.8 |
| k(+)-transporting atpase subunit c | AMR72_RS00575 | Not Available | Negative | 121871 - 122437 | 20427.0 |
| potassium-transporting atpase subunit kdpb | AMR72_RS00580 | Not Available | Negative | 122449 - 124482 | 72435.9 |
| potassium-transporting atpase subunit kdpa | AMR72_RS00585 | Not Available | Negative | 124493 - 126181 | 60757.0 |
| hypothetical protein | AMR72_RS00590 | Not Available | Negative | 126386 - 126667 | 10363.7 |
| sigma-54 dependent transcriptional regulator | AMR72_RS00595 | Not Available | Negative | 126836 - 128185 | 50074.5 |
| glycosyltransferase family 2 protein | AMR72_RS00600 | Not Available | Positive | 128633 - 130129 | 56904.1 |
| hypothetical protein | AMR72_RS00605 | Not Available | Negative | 130189 - 131343 | 44330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
