Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rep-associated tyrosine transposase | AMR72_RS05920 | Not Available | Negative | 1336431 - 1336979 | 21638.8 |
| hypothetical protein | AMR72_RS05925 | Not Available | Positive | 1337251 - 1337865 | 22907.2 |
| hypothetical protein | AMR72_RS05930 | Not Available | Positive | 1338030 - 1338263 | 8783.38 |
| histidine--trna ligase | AMR72_RS05935 | Not Available | Negative | 1338438 - 1339862 | 52822.5 |
| hypothetical protein | AMR72_RS05940 | Not Available | Negative | 1340114 - 1340323 | 7654.97 |
| hypothetical protein | AMR72_RS05945 | Not Available | Negative | 1340582 - 1341268 | 26606.1 |
| abc transporter permease | AMR72_RS05950 | Not Available | Positive | 1341457 - 1342701 | 45282.4 |
| giy-yig nuclease family protein | AMR72_RS05955 | Not Available | Positive | 1342931 - 1343239 | 12193.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | AMR72_RS05960 | Not Available | Negative | 1343560 - 1344408 | 31987.0 |
| gnat family n-acetyltransferase | AMR72_RS05965 | Not Available | Negative | 1344606 - 1345100 | 17996.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
