Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | AMR72_RS05670 | Not Available | Negative | 1296516 - 1297274 | 28338.1 |
| hypothetical protein | AMR72_RS05675 | Not Available | Negative | 1297339 - 1297536 | 7223.12 |
| cytochrome b/b6 domain-containing protein | AMR72_RS05680 | Not Available | Negative | 1297563 - 1298141 | 21797.3 |
| duf5686 and carboxypeptidase regulatory-like domain-containing protein | AMR72_RS05685 | Not Available | Positive | 1298348 - 1300813 | 93853.4 |
| s41 family peptidase | AMR72_RS05690 | Not Available | Positive | 1300817 - 1302448 | 61693.6 |
| simpl domain-containing protein | AMR72_RS05695 | Not Available | Negative | 1302591 - 1303283 | 25865.2 |
| hypothetical protein | AMR72_RS05700 | Not Available | Negative | 1303357 - 1303854 | 18966.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | AMR72_RS05705 | Not Available | Negative | 1303939 - 1305249 | 47821.2 |
| duf4290 domain-containing protein | AMR72_RS05710 | Not Available | Negative | 1305285 - 1305980 | 27238.5 |
| duf493 family protein | AMR72_RS05715 | Not Available | Negative | 1305997 - 1306281 | 10635.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
