Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | AMR72_RS05470 | Not Available | Positive | 1255075 - 1255371 | 11888.4 |
| abc transporter substrate-binding protein | AMR72_RS05475 | Not Available | Positive | 1255374 - 1256975 | 60557.5 |
| transposase | AMR72_RS05480 | Not Available | Positive | 1257118 - 1257588 | 18421.1 |
| pepsy-like domain-containing protein | AMR72_RS05485 | Not Available | Positive | 1258229 - 1258648 | 15460.5 |
| response regulator transcription factor | AMR72_RS05490 | Not Available | Positive | 1258734 - 1259405 | 25275.4 |
| sensor histidine kinase kdpd | AMR72_RS05495 | Not Available | Positive | 1259405 - 1260682 | 48521.4 |
| pepsy-like domain-containing protein | AMR72_RS05500 | Not Available | Positive | 1260757 - 1261200 | 16357.7 |
| pepsy-like domain-containing protein | AMR72_RS05505 | Not Available | Positive | 1261217 - 1261681 | 16964.4 |
| thermonuclease family protein | AMR72_RS05510 | Not Available | Negative | 1261731 - 1262276 | 20833.6 |
| glmu family protein | AMR72_RS05515 | Not Available | Negative | 1262365 - 1263543 | 44002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
