Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome oxidase assembly protein ccos | AMR72_RS00510 | Not Available | Positive | 109036 - 109209 | 6661.07 |
| cytochrome-c oxidase, cbb3-type subunit i | AMR72_RS00515 | Not Available | Positive | 109212 - 111410 | 83654.8 |
| cytochrome c oxidase subunit iv | AMR72_RS00520 | Not Available | Positive | 111416 - 111625 | 8159.88 |
| cbb3-type cytochrome c oxidase n-terminal domain-containing protein | AMR72_RS00525 | Not Available | Positive | 111622 - 112542 | 34316.6 |
| cytochrome c oxidase accessory protein ccog | AMR72_RS00530 | Not Available | Positive | 112548 - 113966 | 53779.0 |
| fixh family protein | AMR72_RS00535 | Not Available | Positive | 113979 - 114425 | 17081.5 |
| sulfite exporter taue/safe family protein | AMR72_RS00540 | Not Available | Positive | 114504 - 115205 | 25152.0 |
| crp/fnr family transcriptional regulator | AMR72_RS00545 | Not Available | Negative | 115208 - 115777 | 22163.7 |
| duf2798 domain-containing protein | AMR72_RS00550 | Not Available | Negative | 115834 - 116061 | 8850.32 |
| oxygen-independent coproporphyrinogen iii oxidase | AMR72_RS00555 | Not Available | Negative | 116143 - 117507 | 52577.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
