Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | AMR72_RS05370 | Not Available | Negative | 1236396 - 1236947 | 19456.0 |
| coth kinase family protein | AMR72_RS05375 | Not Available | Negative | 1237138 - 1239183 | 76162.2 |
| hypothetical protein | AMR72_RS05380 | Not Available | Positive | 1239319 - 1239804 | 19016.1 |
| carbamoyl-phosphate synthase large subunit | AMR72_RS05385 | Not Available | Negative | 1239854 - 1242706 | 105770.0 |
| 50s ribosomal protein l34 | AMR72_RS05390 | Not Available | Negative | 1242875 - 1243036 | 6343.86 |
| hypothetical protein | AMR72_RS05395 | Not Available | Positive | 1243218 - 1243757 | 20330.6 |
| gyri-like domain-containing protein | AMR72_RS05400 | Not Available | Positive | 1244000 - 1244464 | 17277.3 |
| hypothetical protein | AMR72_RS05405 | Not Available | Positive | 1244536 - 1244943 | 14953.8 |
| thioredoxin family protein | AMR72_RS05410 | Not Available | Positive | 1245039 - 1245737 | 26788.6 |
| lytic transglycosylase domain-containing protein | AMR72_RS05415 | Not Available | Negative | 1245834 - 1246721 | 33113.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
