Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AMR72_RS05170 | Not Available | Positive | 1195080 - 1195919 | 32353.5 |
| t9ss type b sorting domain-containing protein | AMR72_RS05175 | Not Available | Positive | 1196049 - 1197650 | 58836.5 |
| t9ss type b sorting domain-containing protein | AMR72_RS05180 | Not Available | Positive | 1197691 - 1203165 | 199513.0 |
| t9ss type b sorting domain-containing protein | AMR72_RS05185 | Not Available | Positive | 1203203 - 1205716 | 91463.1 |
| duf6705 family protein | AMR72_RS05190 | Not Available | Negative | 1205749 - 1206363 | 23779.3 |
| translational gtpase typa | AMR72_RS05195 | Not Available | Negative | 1206694 - 1208493 | 67437.6 |
| merr family transcriptional regulator | AMR72_RS05200 | Not Available | Positive | 1208915 - 1209817 | 34552.1 |
| nad(p)/fad-dependent oxidoreductase | AMR72_RS05205 | Not Available | Positive | 1209869 - 1211356 | 55991.7 |
| phytoene/squalene synthase family protein | AMR72_RS05210 | Not Available | Positive | 1211362 - 1212201 | 32313.8 |
| sterol desaturase family protein | AMR72_RS05215 | Not Available | Positive | 1212214 - 1212660 | 18115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
