Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5606 domain-containing protein | AMR72_RS04970 | Not Available | Negative | 1155457 - 1155900 | 16414.5 |
| peptide deformylase | AMR72_RS04975 | Not Available | Negative | 1155956 - 1156543 | 22464.1 |
| fusc family membrane protein | AMR72_RS04980 | Not Available | Positive | 1156723 - 1158942 | 83915.7 |
| hypothetical protein | AMR72_RS04985 | Not Available | Negative | 1159153 - 1159623 | 18237.2 |
| malate:quinone oxidoreductase | AMR72_RS04990 | Not Available | Negative | 1159761 - 1161269 | 55916.2 |
| holliday junction resolvase ruvx | AMR72_RS04995 | Not Available | Negative | 1161379 - 1161792 | 15402.8 |
| class i sam-dependent methyltransferase | AMR72_RS05000 | Not Available | Negative | 1161887 - 1162624 | 28560.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AMR72_RS05005 | Not Available | Positive | 1162749 - 1163564 | 29345.6 |
| glycosyltransferase family 9 protein | AMR72_RS05010 | Not Available | Positive | 1164372 - 1165403 | 38852.4 |
| glycosyltransferase family 2 protein | AMR72_RS05015 | Not Available | Negative | 1165396 - 1166205 | 30743.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
