Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMR72_RS00460 | Not Available | Negative | 98597 - 99730 | 42236.8 |
| phage tail protein | AMR72_RS00465 | Not Available | Negative | 99783 - 100355 | 19848.6 |
| phage tail protein | AMR72_RS00470 | Not Available | Negative | 100379 - 100954 | 19723.4 |
| hypothetical protein | AMR72_RS00475 | Not Available | Positive | 101394 - 101735 | 12900.1 |
| hypothetical protein | AMR72_RS00480 | Not Available | Positive | 101743 - 102390 | 25006.5 |
| sensor histidine kinase | AMR72_RS00485 | Not Available | Positive | 102348 - 103142 | 30145.5 |
| response regulator transcription factor | AMR72_RS00490 | Not Available | Positive | 103148 - 103834 | 25987.6 |
| hypothetical protein | AMR72_RS00495 | Not Available | Positive | 103947 - 105761 | 67864.6 |
| crp/fnr family transcriptional regulator | AMR72_RS00500 | Not Available | Negative | 105762 - 106442 | 25163.8 |
| heavy metal translocating p-type atpase metal-binding domain-containing protein | AMR72_RS00505 | Not Available | Positive | 106549 - 108933 | 89846.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
