Acinetobacter bereziniae strain HPC229

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter bereziniae strain HPC229 is a bacterium primarily found in soil and associated with vegetables. This strain is characterized by having seven replicons, which suggests a complex plasmid and chromosome organization that may contribute to its adaptability and genetic diversity. The genetic information of strain HPC229 is cataloged under several accessions: NZ_CM012182.1, NZ_CM012185.1, NZ_CM012186.1, NZ_CM012324.1, NZ_CM012183.1, NZ_CM012184.1, and LKDJ00000000.2. These accessions provide a foundation for further genomic studies and insights into the strain's characteristics and potential applications. The ecological role of Acinetobacter bereziniae in soil and vegetable environments may involve interactions with plant roots and other microorganisms. This can influence nutrient cycling and soil health, highlighting the importance of studying such bacteria in agricultural contexts. Understanding the genetic makeup and ecological interactions of HPC229 could illuminate its potential benefits or risks in various environmental settings, particularly in agricultural systems where it coexists with crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter bereziniae
Strainstrain HPC229

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter bereziniae strain HPC229
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil; vegetables
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter bereziniae strain HPC229 plasmid pAbe229-1, whole

Gene Summary

Adenine Count

417 bp

Thymine Count

421 bp

Guanine Count

260 bp

Cytosine Count

231 bp

Genome Length

1329 bp

Protein-coding Genes

1 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitNDM229_RS00090P38054Negative14766 - 17912114783.0
efflux rnd transporter periplasmic adaptor subunitNDM229_RS00095Q9ZHD0Negative17926 - 1942554421.7
alkaline phosphataseNDM229_RS00100Not AvailableNegative19425 - 2050140422.2
type ii toxin-antitoxin system hipa family toxinNDM229_RS00105Not AvailableNegative21078 - 2234347677.1
helix-turn-helix domain-containing proteinNDM229_RS00110Not AvailableNegative22343 - 2264811568.1
hypothetical proteinNDM229_RS00115Not AvailableNegative23568 - 238259587.5
putative adenosine monophosphate-protein transferase ficNDM229_RS00125P20751Negative24175 - 2477123046.5
yhfg family proteinNDM229_RS00130Not AvailableNegative24784 - 249516396.63
hypothetical proteinNDM229_RS00135Not AvailablePositive25229 - 2569318476.1
hypothetical proteinNDM229_RS00140Not AvailablePositive25706 - 2804591686.1

Displaying genes 81 – 90 of 4445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

27 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003419trimethylamineC3H9NChemical structure of trimethylamine75-50-3
Average59.1103Da
Monoisotopic59.07349929Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm00034704-(phosphooxy)-L-threonineC4H8NO7PChemical structure of 4-(phosphooxy)-L-threonineNot available
Average213.083Da
Monoisotopic213.0049358Da

Displaying 1–10 of 27 metabolites

Health Effects

No health effects information available for this bacterium.