Acinetobacter bereziniae strain HPC229

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter bereziniae strain HPC229 is a bacterium primarily found in soil and associated with vegetables. This strain is characterized by having seven replicons, which suggests a complex plasmid and chromosome organization that may contribute to its adaptability and genetic diversity. The genetic information of strain HPC229 is cataloged under several accessions: NZ_CM012182.1, NZ_CM012185.1, NZ_CM012186.1, NZ_CM012324.1, NZ_CM012183.1, NZ_CM012184.1, and LKDJ00000000.2. These accessions provide a foundation for further genomic studies and insights into the strain's characteristics and potential applications. The ecological role of Acinetobacter bereziniae in soil and vegetable environments may involve interactions with plant roots and other microorganisms. This can influence nutrient cycling and soil health, highlighting the importance of studying such bacteria in agricultural contexts. Understanding the genetic makeup and ecological interactions of HPC229 could illuminate its potential benefits or risks in various environmental settings, particularly in agricultural systems where it coexists with crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter bereziniae
Strainstrain HPC229

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter bereziniae strain HPC229
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil; vegetables
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter bereziniae strain HPC229 plasmid pNDM229, whole

Gene Summary

Adenine Count

13727 bp

Thymine Count

12650 bp

Guanine Count

9390 bp

Cytosine Count

8793 bp

Genome Length

44560 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNDM229_RS00005Not AvailablePositive893 - 11057778.23
aaa family atpaseNDM229_RS00795P55418Positive274 - 3186110771.0
duf1173 family proteinNDM229_RS00800Not AvailablePositive3201 - 444546694.8
hypothetical proteinNDM229_RS00805Not AvailablePositive4456 - 490816937.0
hypothetical proteinNDM229_RS00810Not AvailableNegative4970 - 540716618.5
is3-like element isaba14 family transposaseNDM229_RS00815Not AvailablePositive5515 - 664743451.4
aph(3')-vi family aminoglycoside o-phosphotransferaseNDM229_RS00820P09885Positive6753 - 753230278.8
is30 family transposaseNDM229_RS00825Not AvailablePositive7741 - 870937471.3
subclass b1 metallo-beta-lactamase ndm-1NDM229_RS00830C7C422Positive8810 - 962228501.1
bleomycin binding protein ble-mblNDM229_RS00835P13081Positive9626 - 999113440.0

Displaying genes 1 – 10 of 4445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003052kanamycin 3'-phosphateC18H39N4O14PChemical structure of kanamycin 3'-phosphateNot available
Average566.497Da
Monoisotopic566.2189418Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.