Acinetobacter bereziniae strain HPC229

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter bereziniae strain HPC229 is a bacterium primarily found in soil and associated with vegetables. This strain is characterized by having seven replicons, which suggests a complex plasmid and chromosome organization that may contribute to its adaptability and genetic diversity. The genetic information of strain HPC229 is cataloged under several accessions: NZ_CM012182.1, NZ_CM012185.1, NZ_CM012186.1, NZ_CM012324.1, NZ_CM012183.1, NZ_CM012184.1, and LKDJ00000000.2. These accessions provide a foundation for further genomic studies and insights into the strain's characteristics and potential applications. The ecological role of Acinetobacter bereziniae in soil and vegetable environments may involve interactions with plant roots and other microorganisms. This can influence nutrient cycling and soil health, highlighting the importance of studying such bacteria in agricultural contexts. Understanding the genetic makeup and ecological interactions of HPC229 could illuminate its potential benefits or risks in various environmental settings, particularly in agricultural systems where it coexists with crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter bereziniae
Strainstrain HPC229

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter bereziniae strain HPC229
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil; vegetables
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter bereziniae strain HPC229 plasmid pAbe229-9, whole

Gene Summary

Adenine Count

3154 bp

Thymine Count

2758 bp

Guanine Count

1498 bp

Cytosine Count

1744 bp

Genome Length

9154 bp

Protein-coding Genes

13 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNDM229_RS00005Not AvailablePositive893 - 11057778.23
aaa family atpaseNDM229_RS00795P55418Positive274 - 3186110771.0
duf1173 family proteinNDM229_RS00800Not AvailablePositive3201 - 444546694.8
hypothetical proteinNDM229_RS00805Not AvailablePositive4456 - 490816937.0
hypothetical proteinNDM229_RS00810Not AvailableNegative4970 - 540716618.5
is3-like element isaba14 family transposaseNDM229_RS00815Not AvailablePositive5515 - 664743451.4
aph(3')-vi family aminoglycoside o-phosphotransferaseNDM229_RS00820P09885Positive6753 - 753230278.8
is30 family transposaseNDM229_RS00825Not AvailablePositive7741 - 870937471.3
subclass b1 metallo-beta-lactamase ndm-1NDM229_RS00830C7C422Positive8810 - 962228501.1
bleomycin binding protein ble-mblNDM229_RS00835P13081Positive9626 - 999113440.0

Displaying genes 1 – 10 of 4445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003091GDP-4-dehydro-alpha-D-rhamnoseC16H21N5O15P2Chemical structure of GDP-4-dehydro-alpha-D-rhamnoseNot available
Average585.313Da
Monoisotopic585.052036152Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm00037234-(gamma-L-glutamylamino)butanoateC9H15N2O5Chemical structure of 4-(gamma-L-glutamylamino)butanoateNot available
Average231.229Da
Monoisotopic231.0986452Da
BASm00041244-(gamma-L-glutamylamino)butanalC9H16N2O4Chemical structure of 4-(gamma-L-glutamylamino)butanalNot available
Average216.2343Da
Monoisotopic216.11100701Da
BASm00042362-heptyl-4(1H)-quinoloneC16H21NOChemical structure of 2-heptyl-4(1H)-quinoloneNot available
Average243.35Da
Monoisotopic243.1623143Da
BASm000806817-(4-hydroxyphenyl)heptadecanoateC23H37O3Chemical structure of 17-(4-hydroxyphenyl)heptadecanoateNot available
Average361.547Da
Monoisotopic361.2748186Da
BASm000807119-(4-hydroxyphenyl)nonadecanoateC25H41O3Chemical structure of 19-(4-hydroxyphenyl)nonadecanoateNot available
Average389.601Da
Monoisotopic389.3061188Da

Displaying 1–10 of 14 metabolites

Health Effects

No health effects information available for this bacterium.