Acinetobacter bereziniae strain HPC229

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter bereziniae strain HPC229 is a bacterium primarily found in soil and associated with vegetables. This strain is characterized by having seven replicons, which suggests a complex plasmid and chromosome organization that may contribute to its adaptability and genetic diversity. The genetic information of strain HPC229 is cataloged under several accessions: NZ_CM012182.1, NZ_CM012185.1, NZ_CM012186.1, NZ_CM012324.1, NZ_CM012183.1, NZ_CM012184.1, and LKDJ00000000.2. These accessions provide a foundation for further genomic studies and insights into the strain's characteristics and potential applications. The ecological role of Acinetobacter bereziniae in soil and vegetable environments may involve interactions with plant roots and other microorganisms. This can influence nutrient cycling and soil health, highlighting the importance of studying such bacteria in agricultural contexts. Understanding the genetic makeup and ecological interactions of HPC229 could illuminate its potential benefits or risks in various environmental settings, particularly in agricultural systems where it coexists with crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter bereziniae
Strainstrain HPC229

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter bereziniae strain HPC229
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil; vegetables
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter bereziniae strain HPC229 plasmid pAbe229-4, whole

Gene Summary

Adenine Count

1358 bp

Thymine Count

1471 bp

Guanine Count

695 bp

Cytosine Count

926 bp

Genome Length

4450 bp

Protein-coding Genes

7 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNDM229_RS00005Not AvailablePositive893 - 11057778.23
aaa family atpaseNDM229_RS00795P55418Positive274 - 3186110771.0
duf1173 family proteinNDM229_RS00800Not AvailablePositive3201 - 444546694.8
hypothetical proteinNDM229_RS00805Not AvailablePositive4456 - 490816937.0
hypothetical proteinNDM229_RS00810Not AvailableNegative4970 - 540716618.5
is3-like element isaba14 family transposaseNDM229_RS00815Not AvailablePositive5515 - 664743451.4
aph(3')-vi family aminoglycoside o-phosphotransferaseNDM229_RS00820P09885Positive6753 - 753230278.8
is30 family transposaseNDM229_RS00825Not AvailablePositive7741 - 870937471.3
subclass b1 metallo-beta-lactamase ndm-1NDM229_RS00830C7C422Positive8810 - 962228501.1
bleomycin binding protein ble-mblNDM229_RS00835P13081Positive9626 - 999113440.0

Displaying genes 1 – 10 of 4445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

37 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0001971heptanedioateC7H10O4Chemical structure of heptanedioateNot available
Average158.154Da
Monoisotopic158.059006Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da

Displaying 1–10 of 37 metabolites

Health Effects

No health effects information available for this bacterium.