Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. An116 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
658739 bp
Thymine Count
689068 bp
Guanine Count
979704 bp
Cytosine Count
926729 bp
Genome Length
3254240 bp
Protein-coding Genes
2589 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retaining alpha-galactosidase | B5E60_01545 | Not Available | Negative | 388574 - 390565 | 74403.2 |
| mbl fold metallo-hydrolase | B5E60_01550 | Not Available | Positive | 390727 - 391512 | 29660.6 |
| short chain dehydrogenase | B5E60_01555 | Not Available | Positive | 391529 - 392344 | 29689.4 |
| glucuronyl hydrolase | B5E60_01560 | Not Available | Positive | 392934 - 394130 | 44700.5 |
| heparitin sulfate lyase | B5E60_01565 | Not Available | Positive | 394159 - 397113 | 110761.0 |
| hypothetical protein | B5E60_01570 | Not Available | Positive | 397135 - 399243 | 74278.8 |
| susc/raga family tonb-linked outer membrane protein | B5E60_01575 | Not Available | Positive | 399262 - 402420 | 116676.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5E60_01580 | Not Available | Positive | 402435 - 404078 | 62060.5 |
| heparitin sulfate lyase | B5E60_01585 | Not Available | Negative | 404415 - 405551 | 42304.2 |
| heparinase | B5E60_01590 | Not Available | Negative | 405562 - 407562 | 77179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
