Alistipes onderdonkii strain An90

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes onderdonkii strain An90 is a Gram-negative, anaerobic bacterium that belongs to the family of the prevalent gut microbiota. One of the significant traits of this strain is its anaerobic requirement for growth, which indicates that it thrives in environments devoid of oxygen. This characteristic is essential for its survival and metabolic processes, as it relies on anaerobic conditions typical of the digestive tract. Furthermore, Alistipes onderdonkii strain An90 possesses flagella, which suggests that it has the capability for motility. The presence of flagella may facilitate its movement within the anaerobic environment of the gut, potentially allowing it to colonize specific niches or evade immune responses. This strain contains a single replicon, indicating a streamlined genomic organization, which may contribute to its adaptability and efficiency in nutrient utilization in the complex ecosystem of the gastrointestinal tract. The genomic information for Alistipes onderdonkii strain An90 is accessible in the nucleotide database under the accession number NFHB00000000.1. In terms of ecological importance, Alistipes species, including strain An90, are often associated with human gut health and may play a role in maintaining a balanced microbiota. Their ability to thrive in anaerobic conditions and their motility might enable them to influence the gut environment positively, potentially impacting digestion, nutrient absorption, and immune function. Understanding such traits is crucial for further research into the roles of gut microbiota in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes onderdonkii
Strainstrain An90

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes onderdonkii strain An90


Gene Summary

Adenine Count

715961 bp

Thymine Count

728375 bp

Guanine Count

1019402 bp

Cytosine Count

1019602 bp

Genome Length

3483340 bp

Protein-coding Genes

2760 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susc/raga family proteinB5G41_13035Not AvailableNegative3194546 - 319541230098.5
rna polymerase subunit sigmaB5G41_13040Not AvailableNegative3195736 - 319668335862.0
rna polymerase subunit sigma-70B5G41_13045Not AvailablePositive3197000 - 319758123140.2
two-component sensor histidine kinaseB5G41_13050Not AvailableNegative3197601 - 319959874251.0
hypothetical proteinB5G41_13055Not AvailableNegative3199741 - 31999297149.99
trna pseudouridine synthase aB5G41_13060Not AvailableNegative3199952 - 320071628890.3
aspartate ammonia-lyaseB5G41_13065Not AvailableNegative3200757 - 320218752087.1
hypothetical proteinB5G41_13070Not AvailablePositive3202551 - 32027426567.61
4-hydroxy-tetrahydrodipicolinate reductaseB5G41_13075Not AvailablePositive3202921 - 320367627148.7
s26 family signal peptidaseB5G41_13080Not AvailablePositive3203691 - 320504352547.0

Displaying genes 2571 – 2580 of 2810 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

187 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da

Displaying 1–10 of 187 metabolites

Health Effects

No health effects information available for this bacterium.