Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | strain An90 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
715961 bp
Thymine Count
728375 bp
Guanine Count
1019402 bp
Cytosine Count
1019602 bp
Genome Length
3483340 bp
Protein-coding Genes
2760 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01212 family radical sam protein | B5G41_07835 | Not Available | Negative | 1877979 - 1878935 | 36138.2 |
| endonuclease | B5G41_07840 | Not Available | Negative | 1878938 - 1880440 | 53648.0 |
| d-tyrosyl-trna(tyr) deacylase | B5G41_07845 | Not Available | Negative | 1880453 - 1880908 | 16369.0 |
| rna pseudouridine synthase | B5G41_07850 | Not Available | Negative | 1880921 - 1881607 | 25447.5 |
| cytidine deaminase | B5G41_07855 | Not Available | Negative | 1881638 - 1882093 | 16607.7 |
| simpl domain-containing protein | B5G41_07860 | Not Available | Negative | 1882250 - 1882939 | 25317.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | B5G41_07865 | Not Available | Negative | 1883126 - 1884535 | 52649.4 |
| hypothetical protein | B5G41_07870 | Not Available | Negative | 1884759 - 1885877 | 40881.0 |
| lipase | B5G41_07875 | Not Available | Negative | 1885922 - 1886746 | 30436.6 |
| zn-dependent hydrolase | B5G41_07880 | Not Available | Positive | 1886899 - 1887567 | 24505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
