Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s15p | SAMN05444145_10337 | Not Available | Positive | 1213599 - 1213871 | 10540.8 |
| polyribonucleotide nucleotidyltransferase | SAMN05444145_10338 | Not Available | Positive | 1213964 - 1216207 | 82839.6 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05444145_10339 | Not Available | Positive | 1216416 - 1218137 | 61853.7 |
| deoxyribose-phosphate aldolase | SAMN05444145_10340 | Not Available | Positive | 1218311 - 1219192 | 31807.9 |
| hypothetical protein | SAMN05444145_10341 | Not Available | Positive | 1219551 - 1219901 | 13291.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN05444145_10342 | Not Available | Positive | 1219882 - 1220436 | 21448.3 |
| hypothetical protein | SAMN05444145_10343 | Not Available | Negative | 1220500 - 1220703 | 6991.86 |
| carboxyl-terminal processing protease | SAMN05444145_10344 | Not Available | Negative | 1220696 - 1222330 | 59948.6 |
| protein of unknown function | SAMN05444145_10345 | Not Available | Negative | 1222330 - 1223559 | 46803.6 |
| endonuclease iv | SAMN05444145_10346 | Not Available | Positive | 1223655 - 1224503 | 31362.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
