Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannobiose 2-epimerase | SAMN05444145_10317 | Not Available | Negative | 1184896 - 1186104 | 45642.1 |
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN05444145_10318 | Not Available | Negative | 1186101 - 1187543 | 52873.1 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN05444145_10319 | Not Available | Negative | 1187543 - 1188730 | 44245.1 |
| alpha-glucosidase | SAMN05444145_10320 | Not Available | Negative | 1188757 - 1190733 | 73765.2 |
| protein of unknown function | SAMN05444145_10321 | Not Available | Positive | 1191155 - 1193086 | 71498.9 |
| protein of unknown function | SAMN05444145_10322 | Not Available | Positive | 1193306 - 1193929 | 24033.0 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN05444145_10323 | Not Available | Negative | 1194034 - 1195641 | 59753.6 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444145_10324 | Not Available | Positive | 1196062 - 1197174 | 40714.1 |
| phosphorylase / glycogen(starch) synthase | SAMN05444145_10325 | Not Available | Positive | 1197331 - 1201581 | 161561.0 |
| glycogen debranching enzyme, putative | SAMN05444145_10326 | Not Available | Positive | 1201690 - 1203789 | 78489.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
