Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | SAMN05444145_102409 | Not Available | Positive | 1162598 - 1163578 | 34312.4 |
| sugar or nucleoside kinase, ribokinase family | SAMN05444145_102410 | Not Available | Positive | 1163606 - 1164607 | 35484.1 |
| glycosyltransferase, gt2 family | SAMN05444145_102411 | Not Available | Negative | 1164639 - 1165535 | 33391.5 |
| thiol:disulfide interchange protein dsbd | SAMN05444145_102412 | Not Available | Positive | 1165602 - 1165762 | 5787.11 |
| site-specific recombinase xerd | SAMN05444145_1031 | Not Available | Negative | 1165862 - 1167064 | 46667.3 |
| Trna-gly | Not Available | Not Available | Positive | 1167229 - 1167301 | Not Available |
| glycine c-acetyltransferase | SAMN05444145_1033 | Not Available | Negative | 1167479 - 1168750 | 46874.1 |
| radical sam superfamily protein | SAMN05444145_1034 | Not Available | Positive | 1169061 - 1169834 | 28558.5 |
| hypothetical protein | SAMN05444145_1035 | Not Available | Positive | 1169840 - 1170604 | 29227.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444145_1036 | Not Available | Negative | 1170779 - 1172653 | 67925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
