Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised arcr, cog2043 | SAMN05444145_102399 | Not Available | Negative | 1153974 - 1154693 | 25831.9 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05444145_102400 | Not Available | Negative | 1154698 - 1155234 | 19384.3 |
| succinate dehydrogenase subunit c | SAMN05444145_102401 | Not Available | Positive | 1155366 - 1156061 | 25633.0 |
| succinate dehydrogenase subunit a | SAMN05444145_102402 | Not Available | Positive | 1156098 - 1158044 | 71701.3 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN05444145_102403 | Not Available | Positive | 1158083 - 1158826 | 26683.9 |
| phage shock protein c (pspc) family protein | SAMN05444145_102404 | Not Available | Positive | 1159164 - 1159697 | 19812.8 |
| phage shock protein c (pspc) family protein | SAMN05444145_102405 | Not Available | Positive | 1159710 - 1159919 | 7677.64 |
| transcriptional regulator, padr family | SAMN05444145_102406 | Not Available | Positive | 1159924 - 1160253 | 12615.3 |
| putative auto-transporter adhesin, head gin domain | SAMN05444145_102407 | Not Available | Positive | 1160283 - 1161080 | 26780.7 |
| phage shock protein c (pspc) family protein | SAMN05444145_102408 | Not Available | Positive | 1161102 - 1162424 | 48027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
