Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_102379 | Not Available | Positive | 1128525 - 1129514 | 36370.7 |
| hypothetical protein | SAMN05444145_102380 | Not Available | Positive | 1129528 - 1130901 | 49911.5 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05444145_102381 | Not Available | Negative | 1130984 - 1131592 | 21963.9 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05444145_102382 | Not Available | Positive | 1131641 - 1133797 | 80568.9 |
| hypothetical protein | SAMN05444145_102383 | Not Available | Positive | 1134003 - 1134164 | 5959.9 |
| protein of unknown function | SAMN05444145_102384 | Not Available | Positive | 1134183 - 1136564 | 84947.7 |
| putative carbohydrate metabolism domain-containing protein | SAMN05444145_102385 | Not Available | Positive | 1136706 - 1137836 | 41492.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_102386 | Not Available | Positive | 1137860 - 1138648 | 29578.6 |
| membrane-bound lytic murein transglycosylase f | SAMN05444145_102387 | Not Available | Negative | 1138767 - 1139459 | 25816.7 |
| putative porin | SAMN05444145_102388 | Not Available | Negative | 1139504 - 1141645 | 82548.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
