Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN05444145_102359 | Not Available | Negative | 1102029 - 1102469 | 15525.0 |
| dolichol-phosphate mannosyltransferase | SAMN05444145_102360 | Not Available | Positive | 1102607 - 1103326 | 27312.3 |
| protein of unknown function | SAMN05444145_102361 | Not Available | Positive | 1103333 - 1104553 | 47157.0 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05444145_102362 | Not Available | Negative | 1104550 - 1104918 | 14192.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05444145_102363 | Not Available | Negative | 1104915 - 1106630 | 64836.3 |
| transcriptional regulator, tetr family | SAMN05444145_102364 | Not Available | Positive | 1106844 - 1107467 | 23804.7 |
| dna-binding transcriptional regulator, acrr family | SAMN05444145_102365 | Not Available | Positive | 1107635 - 1108213 | 21720.7 |
| hypothetical protein | SAMN05444145_102366 | Not Available | Positive | 1108452 - 1108742 | 10403.5 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN05444145_102367 | Not Available | Negative | 1108811 - 1110184 | 48863.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_102368 | Not Available | Negative | 1110222 - 1111106 | 33550.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
