Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triosephosphate isomerase (tim) | SAMN05444145_10145 | Not Available | Positive | 55378 - 56484 | 42094.4 |
| rnd family efflux transporter, mfp subunit | SAMN05444145_10146 | Not Available | Positive | 56639 - 57649 | 36423.3 |
| multidrug efflux pump subunit acrb | SAMN05444145_10147 | Not Available | Positive | 57657 - 60689 | 111259.0 |
| outer membrane protein tolc | SAMN05444145_10148 | Not Available | Positive | 60686 - 61924 | 45632.0 |
| putative redox protein | SAMN05444145_10149 | Not Available | Negative | 61973 - 62380 | 14928.9 |
| tetratricopeptide repeat-containing protein | SAMN05444145_10150 | Not Available | Positive | 62492 - 65470 | 110396.0 |
| tonb dependent receptor | SAMN05444145_10151 | Not Available | Positive | 65473 - 67197 | 64217.9 |
| superoxide dismutase, fe-mn family | SAMN05444145_10152 | Not Available | Positive | 67379 - 68104 | 27185.3 |
| quinol monooxygenase ygin | SAMN05444145_10153 | Not Available | Negative | 68163 - 68438 | 10351.5 |
| uncharacterized conserved protein, laba/duf88 family | SAMN05444145_10154 | Not Available | Positive | 68516 - 69337 | 30247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
