Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:h+ antiporter | SAMN05444145_102349 | Not Available | Positive | 1091777 - 1092730 | 33269.8 |
| a/g-specific dna-adenine glycosylase | SAMN05444145_102350 | Not Available | Negative | 1092706 - 1093755 | 39087.9 |
| hypothetical protein | SAMN05444145_102351 | Not Available | Positive | 1093812 - 1094117 | 11367.9 |
| sialate o-acetylesterase | SAMN05444145_102352 | Not Available | Negative | 1094175 - 1095596 | 52415.4 |
| sialate o-acetylesterase | SAMN05444145_102353 | Not Available | Negative | 1095621 - 1097027 | 52357.5 |
| 2tm domain-containing protein | SAMN05444145_102354 | Not Available | Positive | 1097296 - 1097529 | 9267.09 |
| hypothetical protein | SAMN05444145_102355 | Not Available | Positive | 1097542 - 1098132 | 21928.8 |
| dna-binding transcriptional regulator, marr family | SAMN05444145_102356 | Not Available | Positive | 1098137 - 1098421 | 10380.7 |
| uncharacterized membrane protein ybje, duf340 family | SAMN05444145_102357 | Not Available | Negative | 1098446 - 1099363 | 31611.4 |
| asma family protein | SAMN05444145_102358 | Not Available | Negative | 1099369 - 1102032 | 94559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
