Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate oxidase b, electron transfer subunit | SAMN05444145_102339 | Not Available | Negative | 1077817 - 1078557 | 26954.5 |
| carbamoyl-phosphate synthase large subunit | SAMN05444145_102340 | Not Available | Negative | 1078557 - 1081739 | 117847.0 |
| carbamoyl-phosphate synthase small subunit | SAMN05444145_102341 | Not Available | Negative | 1081732 - 1082823 | 40563.6 |
| dihydroorotase | SAMN05444145_102342 | Not Available | Negative | 1083019 - 1084290 | 45752.8 |
| transcriptional regulator, deor family | SAMN05444145_102343 | Not Available | Negative | 1084550 - 1085323 | 28385.5 |
| mfs transporter, opa family, glycerol-3-phosphate transporter/mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN05444145_102344 | Not Available | Negative | 1085550 - 1086998 | 52192.1 |
| glycerol-1-phosphate dehydrogenase | SAMN05444145_102345 | Not Available | Negative | 1087106 - 1088623 | 55801.1 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444145_102346 | Not Available | Positive | 1088713 - 1089891 | 44366.8 |
| nagd protein | SAMN05444145_102347 | Not Available | Positive | 1089901 - 1090764 | 31898.2 |
| zinc transporter, zip family | SAMN05444145_102348 | Not Available | Positive | 1090969 - 1091772 | 28282.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
