Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05444145_102329 | Not Available | Negative | 1066481 - 1067197 | 27091.8 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_102330 | Not Available | Negative | 1067236 - 1068204 | 37105.3 |
| phosphoribosylformylglycinamidine synthase | SAMN05444145_102331 | Not Available | Negative | 1068215 - 1071928 | 136892.0 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05444145_102332 | Not Available | Negative | 1071945 - 1073036 | 40418.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05444145_102333 | Not Available | Negative | 1073036 - 1073485 | 15226.6 |
| aspartate carbamoyltransferase | SAMN05444145_102334 | Not Available | Negative | 1073926 - 1075017 | 41423.6 |
| orotate phosphoribosyltransferase | SAMN05444145_102335 | Not Available | Negative | 1075026 - 1075658 | 22593.3 |
| thioredoxin domain-containing protein | SAMN05444145_102336 | Not Available | Negative | 1075687 - 1075947 | 9946.0 |
| orotidine-5'-phosphate decarboxylase | SAMN05444145_102337 | Not Available | Negative | 1076080 - 1076784 | 25705.1 |
| dihydroorotate dehydrogenase (nad+) catalytic subunit | SAMN05444145_102338 | Not Available | Negative | 1076915 - 1077823 | 32342.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
