Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase subunit g | SAMN05444145_102299 | Not Available | Positive | 1019479 - 1019883 | 15395.8 |
| two component regulator propeller | SAMN05444145_102300 | Not Available | Negative | 1020181 - 1024176 | 148693.0 |
| beta-glucuronidase | SAMN05444145_102301 | Not Available | Negative | 1024318 - 1026147 | 69544.6 |
| beta-glucosidase | SAMN05444145_102302 | Not Available | Negative | 1026158 - 1028353 | 80489.9 |
| pkd-like domain-containing protein | SAMN05444145_102303 | Not Available | Negative | 1028442 - 1030160 | 61995.5 |
| pkd domain-containing protein | SAMN05444145_102304 | Not Available | Negative | 1030179 - 1031531 | 49978.9 |
| hypothetical protein | SAMN05444145_102305 | Not Available | Negative | 1031544 - 1033016 | 55953.4 |
| hypothetical protein | SAMN05444145_102306 | Not Available | Negative | 1033019 - 1034458 | 55683.5 |
| protein of unknown function | SAMN05444145_102307 | Not Available | Negative | 1034475 - 1035464 | 35951.3 |
| starch-binding associating with outer membrane | SAMN05444145_102308 | Not Available | Negative | 1035492 - 1037306 | 68960.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
